Search results for "Genome rearrangements"

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Evolutionary stability of topologically associating domains is associated with conserved gene regulation

2018

AbstractBackgroundThe human genome is highly organized in the three-dimensional nucleus. Chromosomes fold locally into topologically associating domains (TADs) defined by increased intra-domain chromatin contacts. TADs contribute to gene regulation by restricting chromatin interactions of regulatory sequences, such as enhancers, with their target genes. Disruption of TADs can result in altered gene expression and is associated to genetic diseases and cancers. However, it is not clear to which extent TAD regions are conserved in evolution and whether disruption of TADs by evolutionary rearrangements can alter gene expression.ResultsHere, we hypothesize that TADs represent essential functiona…

0301 basic medicinePhysiologyEvolutionGenome rearrangementsGene ExpressionGenomicsPlant ScienceComputational biologyBiologyGenomeGeneral Biochemistry Genetics and Molecular BiologyEvolution Molecular03 medical and health sciencesMiceStructural BiologyHi-CGene expressionAnimalsHumansEnhancerlcsh:QH301-705.5GeneSelectionEcology Evolution Behavior and SystematicsRegulation of gene expressionGenomeTopologically associating domainsGenome HumanCell BiologyTADChromatin Assembly and DisassemblyChromatinGene regulation030104 developmental biologylcsh:Biology (General)Gene Expression RegulationRegulatory sequenceHuman genomeGeneral Agricultural and Biological SciencesStructural variantsChromatin interactions3D genome architectureDevelopmental BiologyBiotechnologyResearch ArticleBMC Biology
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Genome structure reveals the diversity of mating mechanisms in Saccharomyces cerevisiae x Saccharomyces kudriavzevii hybrids, and the genomic instabi…

2020

Interspecific hybridization has played an important role in the evolution of eukaryotic organisms by favouring genetic interchange between divergent lineages to generate new phenotypic diversity involved in the adaptation to new environments. This way, hybridization between Saccharomyces species, involving the fusion between their metabolic capabilities, is a recurrent adaptive strategy in industrial environments. In the present study, whole-genome sequences of natural hybrids between Saccharomyces cerevisiae and Saccharomyces kudriavzevii were obtained to unveil the mechanisms involved in the origin and evolution of hybrids, as well as the ecological and geographic contexts in which sponta…

Genome instabilitybiologyHybridization mechanismsMechanism (biology)Rare-matingSaccharomyces cerevisiaeGenome rearrangementsHybridsGeneral MedicineSaccharomyces cerevisiaebiology.organism_classificationPhenotypeEvolutionary biologyMatingAdaptationSaccharomyces kudriavzeviiSaccharomyces kudriavzeviiHybrid
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